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<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8" />
<title>2-IPython</title>
<script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.1.10/require.min.js"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/2.0.3/jquery.min.js"></script>
<style type="text/css">
/*!
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<p><img src="http://ipython.org/_static/IPy_header.png" alt="minipic">
IPython provides a rich architecture for interactive computing with:</p>
<ul>
<li>Powerful interactive shells (terminal and Qt-based).</li>
<li>A browser-based notebook with support for code, rich text, mathematical expressions, inline plots and other rich media.</li>
<li>Support for interactive data visualization and use of GUI toolkits.</li>
<li>Flexible, embeddable interpreters to load into your own projects.</li>
<li>Easy to use, high performance tools for parallel computing.</li>
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<h3 id="Installing-IPython">Installing IPython<a class="anchor-link" href="#Installing-IPython">¶</a></h3>
<pre><code>$ pip install ipython --user</code></pre>
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<h2 id="IPython">IPython<a class="anchor-link" href="#IPython">¶</a></h2><h3 id="There-are-basically-three-flavors-of-IPython:">There are basically three flavors of IPython:<a class="anchor-link" href="#There-are-basically-three-flavors-of-IPython:">¶</a></h3><ul>
<li>the terminal-based interactive shell console</li>
<li>the Qt-based interactive shell console</li>
<li>the browser-based IPython notebooks
aa</li>
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<p><h3 align="center">IPython terminal</h3>
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<img src="https://raw.githubusercontent.com/hserrano/python-data-analysis/master/img/ip_terminal.png" width="600"></p>
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<h3 id="IPython-qtconsole">IPython qtconsole<a class="anchor-link" href="#IPython-qtconsole">¶</a></h3><ul>
<li>It requires the Qt libraries and their respctive python bindings. </li>
<li>It offers in-line plotting features as well as introspection and help as tooltips. </li>
</ul>
<p><!-- <img src="./img/ip_qtconsole.png" width="600"> -->
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<h2 id="IPython-notebooks">IPython notebooks<a class="anchor-link" href="#IPython-notebooks">¶</a></h2><p>The IPython Notebook is an interactive computational environment, in which you can combine code execution, rich text, mathematics, plots and rich media</p>
<h3 id="Some-of-the-main-features-of-the-IPython-Notebook-app-include:">Some of the main features of the IPython Notebook app include:<a class="anchor-link" href="#Some-of-the-main-features-of-the-IPython-Notebook-app-include:">¶</a></h3><ul>
<li>Display rich data representations (e.g. HTML / LaTeX / SVG) in the browser as a result of computations.</li>
<li>Compose rich text using Markdown and HTML.</li>
<li>Include mathematical equations, rendered directly in the browser by MathJax.</li>
<li>Import standard Python scripts.</li>
<li>In-browser editing, syntax highlighting, tab completion and autoindentation.</li>
<li>Inline figures rendered by the matplotlib library with publication quality, in a range of formats (SVG / PDF / PNG).</li>
</ul>
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<h4 id="First,-let-us-install-it">First, let us install it<a class="anchor-link" href="#First,-let-us-install-it">¶</a></h4>
<pre><code>$ pip install ipython[all] --user</code></pre>
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<p>Now, let's run the ipython notebook server</p>
<pre><code>$ ipython notebook</code></pre>
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<h2 id="Input/Output-cache">Input/Output cache<a class="anchor-link" href="#Input/Output-cache">¶</a></h2>
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<div class=" highlight hl-ipython2"><pre><span class="p">[</span><span class="n">i</span> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="mi">5</span><span class="p">)]</span>
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<pre>[0, 1, 2, 3, 4]</pre>
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<div class=" highlight hl-ipython2"><pre><span class="n">x</span> <span class="o">=</span> <span class="n">Out</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span>
<span class="k">print</span> <span class="n">x</span>
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<pre>[0, 1, 2, 3, 4]
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<div class=" highlight hl-ipython2"><pre><span class="k">print</span> <span class="n">_</span>
<span class="k">print</span> <span class="n">__</span>
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<pre>[0, 1, 2, 3, 4]
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<div class=" highlight hl-ipython2"><pre><span class="k">print</span> <span class="n">In</span><span class="p">[</span><span class="mi">3</span><span class="p">]</span>
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<pre>x = Out[1]
print x
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<h2 id="Introspection-and-in-line-docstrings">Introspection and in-line docstrings<a class="anchor-link" href="#Introspection-and-in-line-docstrings">¶</a></h2><ul>
<li>Auto-complete</li>
<li>In-line help</li>
<li>Docstrings tooltips</li>
</ul>
<h3 id="Auto-complete">Auto-complete<a class="anchor-link" href="#Auto-complete">¶</a></h3><ul>
<li>IPython provides TAB-completion and introspection for objects' attributes and methods.</li>
<li>The TAB-completion also works for the filesystem, suggesting files and directories names.</li>
</ul>
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<div class=" highlight hl-ipython2"><pre><span class="n">z</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span><span class="mi">2</span><span class="p">,</span><span class="mi">3</span><span class="p">,</span><span class="mi">4</span><span class="p">]</span>
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<div class="highlight"><pre><span class="n">z</span><span class="o">.</span> <span class="c">#press tab</span>
<span class="n">z</span><span class="o">.</span><span class="n">append</span> <span class="n">z</span><span class="o">.</span><span class="n">count</span> <span class="n">z</span><span class="o">.</span><span class="n">extend</span> <span class="n">z</span><span class="o">.</span><span class="n">index</span> <span class="n">z</span><span class="o">.</span><span class="n">insert</span> <span class="n">z</span><span class="o">.</span><span class="n">pop</span> <span class="n">z</span><span class="o">.</span><span class="n">remove</span> <span class="n">z</span><span class="o">.</span><span class="n">reverse</span> <span class="n">z</span><span class="o">.</span><span class="n">sort</span>
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<h3 id="Tooltips">Tooltips<a class="anchor-link" href="#Tooltips">¶</a></h3><p>You can press Shift+Tab when calling a method for a tooltip.</p>
<ul>
<li>press multiple times for more and mode information</li>
<li>Press Shift+Tab 3 times to keep the tooltip while you type</li>
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<div class=" highlight hl-ipython2"><pre><span class="n">np</span><span class="o">.</span><span class="n">cumsum</span> <span class="c">#press shift + tab</span>
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<h3 id="Help">Help<a class="anchor-link" href="#Help">¶</a></h3><p>In case you need some help for an object or module, you can use the ?.</p>
<p>For example:
<img src="./img/tt4.png" width="600">
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<h1 id="Markdown">Markdown<a class="anchor-link" href="#Markdown">¶</a></h1><p>IPython notebook cells also support the Markdown syntax for rich text formating.</p>
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<h2 id="Basic-writing">Basic writing<a class="anchor-link" href="#Basic-writing">¶</a></h2><h3 id="Headers">Headers<a class="anchor-link" href="#Headers">¶</a></h3><p>You can use one or more <code>#</code> before your heading text. The number of # you use will determine the size of the heading.</p>
<pre><code>#Top level
##Second level
###Third level</code></pre>
<p>This code on the top produces the result on the bottom.</p>
<h1 id="Top-level">Top level<a class="anchor-link" href="#Top-level">¶</a></h1><h2 id="Second-level">Second level<a class="anchor-link" href="#Second-level">¶</a></h2><h3 id="Third-level">Third level<a class="anchor-link" href="#Third-level">¶</a></h3>
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<h3 id="Blockquotes">Blockquotes<a class="anchor-link" href="#Blockquotes">¶</a></h3><p>You can define blockquotes with a <code>></code></p>
<pre><code>> This is a blockquote</code></pre>
<p>produces</p>
<blockquote><p>This is a blockquote</p>
</blockquote>
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<h3 id="Styling-text">Styling text<a class="anchor-link" href="#Styling-text">¶</a></h3>
<pre><code>*This text will be italic*
**This text will be bold**</code></pre>
<p><em>This text will be italic</em>
<strong>This text will be bold</strong></p>
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<h2 id="Lists">Lists<a class="anchor-link" href="#Lists">¶</a></h2><h3 id="Unordered-list">Unordered list<a class="anchor-link" href="#Unordered-list">¶</a></h3><p>You can make an unordered list by preceding list items with either a <code>*</code> or a <code>-</code>.</p>
<pre><code>* Item
* Item
- Item
- Item</code></pre>
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<li>Item</li>
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<li><p>Item</p>
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<h3 id="Ordered-list">Ordered list<a class="anchor-link" href="#Ordered-list">¶</a></h3>
<pre><code>1. Item 1
1. A corollary to the above item.
2. Yet another point to consider.
2. Item 2
* A corollary that does not need to be ordered.
* This is indented four spaces, because it's two spaces further than the item above.
* You might want to consider making a new list.
3. Item 3</code></pre>
<p>produces</p>
<ol>
<li>Item 1<ol>
<li>A corollary to the above item.</li>
<li>Yet another point to consider.</li>
</ol>
</li>
<li>Item 2<ul>
<li>A corollary that does not need to be ordered.<ul>
<li>This is indented four spaces, because it's two spaces further than the item above.</li>
<li>You might want to consider making a new list.</li>
</ul>
</li>
</ul>
</li>
<li>Item 3</li>
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<h3 id="Source-code">Source code<a class="anchor-link" href="#Source-code">¶</a></h3><p>You can use triple backquotes <code>```</code>to delimit a block where you want to output a piece of code.</p>
<p>` ```
def fact(x):
if x == 1:
return 1
else:
return x*fact(x-1)
<code>``</code></p>
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<pre><code>def fact(x):
if x == 1:
return 1
else:
return x*fact(x-1)</code></pre>
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<p>If you want to highlight the syntax for a particular language, you can do</p>
<p>` ```python
def fact(x):
if x == 1:
return 1
else:
return x*fact(x-1)
<code>``</code></p>
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<div class="highlight"><pre><span class="k">def</span> <span class="nf">fact</span><span class="p">(</span><span class="n">x</span><span class="p">):</span>
<span class="k">if</span> <span class="n">x</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
<span class="k">return</span> <span class="mi">1</span>
<span class="k">else</span><span class="p">:</span>
<span class="k">return</span> <span class="n">x</span><span class="o">*</span><span class="n">fact</span><span class="p">(</span><span class="n">x</span><span class="o">-</span><span class="mi">1</span><span class="p">)</span>
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<p>The syntax highlight feature works for many different languages.</p>
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<div class="highlight"><pre><span class="kn">import</span> <span class="nn">java.util.*</span><span class="o">;</span>
<span class="kd">public</span> <span class="kd">class</span> <span class="nc">Sum2</span> <span class="o">{</span>
<span class="kd">public</span> <span class="kd">static</span> <span class="kt">void</span> <span class="nf">main</span><span class="o">(</span><span class="n">String</span><span class="o">[]</span> <span class="n">args</span><span class="o">)</span> <span class="o">{</span>
<span class="n">Scanner</span> <span class="n">in</span> <span class="o">=</span> <span class="k">new</span> <span class="n">Scanner</span><span class="o">(</span><span class="n">System</span><span class="o">.</span><span class="na">in</span><span class="o">);</span> <span class="c1">// Standard input</span>
<span class="n">System</span><span class="o">.</span><span class="na">out</span><span class="o">.</span><span class="na">println</span><span class="o">(</span><span class="n">in</span><span class="o">.</span><span class="na">nextInt</span><span class="o">()</span> <span class="o">+</span> <span class="n">in</span><span class="o">.</span><span class="na">nextInt</span><span class="o">());</span> <span class="c1">// Standard output</span>
<span class="o">}</span>
<span class="o">}</span>
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<div class="highlight"><pre><span class="c1">// Standard input-output streams</span>
<span class="cp">#include <iostream></span>
<span class="k">using</span> <span class="k">namespace</span> <span class="n">std</span><span class="p">;</span>
<span class="kt">void</span> <span class="nf">main</span><span class="p">()</span>
<span class="p">{</span>
<span class="kt">int</span> <span class="n">a</span><span class="p">,</span> <span class="n">b</span><span class="p">;</span>
<span class="n">cin</span> <span class="o">>></span> <span class="n">a</span> <span class="o">>></span> <span class="n">b</span><span class="p">;</span>
<span class="n">cout</span> <span class="o"><<</span> <span class="n">a</span> <span class="o">+</span> <span class="n">b</span> <span class="o"><<</span> <span class="n">endl</span><span class="p">;</span>
<span class="p">}</span>
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<h3 id="$\LaTeX$">$\LaTeX$<a class="anchor-link" href="#$\LaTeX$">¶</a></h3><p>Markdown cells can also render$\LaTeX$ equations, either in line: $p(x)\propto x^{-\alpha}e^{-\beta x}$ or displayed</p>
\begin{equation}
\int \frac{d\theta}{1+\theta^2}=
\tan^{-1}\theta+C
\end{equation}
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<pre><code>Latex
Markdown cells can also render $\LaTeX$ equations, either in line: $p(x)\propto x^{-\alpha}e^{-\beta x}$ or displayed
\begin{equation}
\int \frac{d\theta}{1+\theta^2}=\tan^{-1}\theta+C
\end{equation}</code></pre>
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<h3 id="HTML">HTML<a class="anchor-link" href="#HTML">¶</a></h3>
<pre><code><table>
<tr>
<th>Header 1</th>
<th>Header 2</th>
</tr>
<tr>
<td>row 1, cell 1</td>
<td>row 1, cell 2</td>
</tr>
<tr>
<td>row 2, cell 1</td>
<td>row 2, cell 2</td>
</tr>
</table></code></pre>
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<table>
<tr>
<th>Header 1</th>
<th>Header 2</th>
</tr>
<tr>
<td>row 1, cell 1</td>
<td>row 1, cell 2</td>
</tr>
<tr>
<td>row 2, cell 1</td>
<td>row 2, cell 2</td>
</tr>
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<h3 id="Images">Images<a class="anchor-link" href="#Images">¶</a></h3><p>There are many different ways to insert images into IPython notebooks. Markdown cells support both the Markdown syntax</p>
<pre><code>markdown
</code></pre>
<p>and the HTML syntax.</p>
<pre><code>HTML
<img src="./img/ipython.png" width="200"></code></pre>
<p><img src="./img/ipython.png">
The HTML is more flexible since it gives you more control on how the image is gonna be displayed.</p>
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<h3 id="Videos">Videos<a class="anchor-link" href="#Videos">¶</a></h3><p>It's also possible to embed videos into Markdown cells.</p>
<pre><code>HTML
<video controls src="./img/animation.m4v" /></code></pre>
<video controls src="./img/animation.m4v" />
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<h2 id="IPython-magics">IPython magics<a class="anchor-link" href="#IPython-magics">¶</a></h2><p>IPython has a set of predefined ‘magic functions’ that you can call with a command line style syntax. There are two kinds of magics, line-oriented and cell-oriented.</p>
<ul>
<li>%timeit</li>
<li>%store</li>
</ul>
<p>*you read more about these and other magic functions here: <a href="https://ipython.org/ipython-doc/dev/interactive/tutorial.html#magic-functions">https://ipython.org/ipython-doc/dev/interactive/tutorial.html#magic-functions</a></p>
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<h2 id="%timeit">%timeit<a class="anchor-link" href="#%timeit">¶</a></h2><p>Simple way to test the running time of a piece of code</p>
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<div class=" highlight hl-ipython2"><pre><span class="k">def</span> <span class="nf">fib</span><span class="p">(</span><span class="n">n</span><span class="p">):</span>
<span class="k">if</span> <span class="n">n</span><span class="o"><=</span><span class="mi">2</span><span class="p">:</span>
<span class="n">result</span><span class="o">=</span> <span class="mi">1</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">result</span> <span class="o">=</span> <span class="n">fib</span><span class="p">(</span><span class="n">n</span><span class="o">-</span><span class="mi">1</span><span class="p">)</span><span class="o">+</span><span class="n">fib</span><span class="p">(</span><span class="n">n</span><span class="o">-</span><span class="mi">2</span><span class="p">)</span>
<span class="k">return</span> <span class="n">result</span>
<span class="k">def</span> <span class="nf">fib_prev</span><span class="p">(</span><span class="n">n</span><span class="p">):</span>
<span class="n">prev1</span> <span class="o">=</span> <span class="mi">0</span>
<span class="n">prev2</span> <span class="o">=</span> <span class="mi">1</span>
<span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">n</span><span class="p">):</span>
<span class="n">prev1</span><span class="p">,</span><span class="n">prev2</span> <span class="o">=</span> <span class="n">prev2</span><span class="p">,</span><span class="n">prev1</span><span class="o">+</span><span class="n">prev2</span>
<span class="k">return</span> <span class="n">prev1</span>
<span class="n">memo</span> <span class="o">=</span> <span class="p">{}</span>
<span class="k">def</span> <span class="nf">memoized_fib</span><span class="p">(</span><span class="n">n</span><span class="p">):</span>
<span class="k">if</span> <span class="n">memo</span><span class="o">.</span><span class="n">has_key</span><span class="p">(</span><span class="n">n</span><span class="p">):</span>
<span class="k">return</span> <span class="n">memo</span><span class="p">[</span><span class="n">n</span><span class="p">]</span>
<span class="k">else</span><span class="p">:</span>
<span class="k">if</span> <span class="n">n</span> <span class="o">==</span> <span class="mi">1</span> <span class="ow">or</span> <span class="n">n</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
<span class="n">result</span> <span class="o">=</span> <span class="mi">1</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">result</span> <span class="o">=</span> <span class="n">memoized_fib</span><span class="p">(</span><span class="n">n</span><span class="o">-</span><span class="mi">1</span><span class="p">)</span> <span class="o">+</span> <span class="n">memoized_fib</span><span class="p">(</span><span class="n">n</span><span class="o">-</span><span class="mi">2</span><span class="p">)</span>
<span class="n">memo</span><span class="p">[</span><span class="n">n</span><span class="p">]</span> <span class="o">=</span> <span class="n">result</span>
<span class="k">return</span> <span class="n">result</span>
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<div class=" highlight hl-ipython2"><pre><span class="o">%</span><span class="k">timeit</span> fib(30)
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<pre>1 loops, best of 3: 270 ms per loop
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<div class=" highlight hl-ipython2"><pre><span class="o">%</span><span class="k">timeit</span> fib_prev(30)
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<pre>100000 loops, best of 3: 4.49 µs per loop
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<div class=" highlight hl-ipython2"><pre><span class="o">%</span><span class="k">timeit</span> memoized_fib(30)
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<pre>The slowest run took 10.86 times longer than the fastest. This could mean that an intermediate result is being cached
1000000 loops, best of 3: 263 ns per loop
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