Issues

• design descriptor section parsing issue if n>128

  ISA-tools/isa-api#622 · Filter by author proccaserra opened on May 22, 2026
  

• update context_url in json2jsonld.py

  bug
  ISA-tools/isa-api#613 · Filter by author proccaserra opened on Feb 10, 2026
  

• unused variables in json2jsonld.py code

  clean-up
  ISA-tools/isa-api#610 · Filter by author proccaserra opened on Feb 6, 2026
  

• ISA-TAB writer and column order for 'Normalisation Name', 'Data Transformation Name', 'Derived Data File'

  ISA-tools/isa-api#602 · Filter by author proccaserra opened on Nov 10, 2025

• if Ontology Name evaluates to a Number by Pandas, ISA parsing fails

  enhancement
  ISA-tools/isa-api#587 · Filter by author proccaserra opened on Oct 16, 2025
  

• AttributeError 'pkgutil' again Python 3.13

  ISA-tools/isa-api#581 · Filter by author stuchalk opened on Jul 21, 2025

• ISA configurations & ISA-JSON

  discussion requireddocumentationenhancement
  ISA-tools/isa-api#559 · Filter by author proccaserra opened on Apr 29, 2024
  

• Test Data Validation Changes

  ISA-tools/isa-api#558 · Filter by author ptth222 opened on Mar 29, 2024
  1

• implement a guard in material.py

  enhancement
  ISA-tools/isa-api#543 · Filter by author proccaserra opened on Feb 23, 2024
  

• refactoring needed in assay_templates.py to properly handle Ontology Source

  enhancement
  ISA-tools/isa-api#542 · Filter by author proccaserra opened on Feb 23, 2024
  

• rewrite more atomic tests for Process sequence to elucidate counts of events

  ISA-tools/isa-api#541 · Filter by author proccaserra opened on Feb 23, 2024
  

• investigation why magetab2json on MEXP31 can not complete isa.json validation following refactor

  bug
  ISA-tools/isa-api#537 · Filter by author proccaserra opened on Feb 21, 2024
  

• documentation needed for requesting new context files for ISA

  documentation
  ISA-tools/isa-api#536 · Filter by author proccaserra opened on Feb 19, 2024
  

• in datafile.py, ensure checkum_value can not be set if checksum_type is not specified

  enhancement
  ISA-tools/isa-api#535 · Filter by author proccaserra opened on Feb 19, 2024
  

• Inconsistencies Between Code, Documentation, and Schema

  ISA-tools/isa-api#534 · Filter by author ptth222 opened on Feb 16, 2024
  5

  

• ISA Tab Validation Rule Exception Messaging

  ISA-tools/isa-api#522 · Filter by author ptth222 opened on Jan 23, 2024
  1

  

• Add new tests to check serialization to TAB/JSON of Quantitative Values with Units (for Characterististics. FV, PV)

  documentationenhancement
  ISA-tools/isa-api#518 · Filter by author proccaserra opened on Jan 8, 2024
  1

  

• ISA converter - use of default configuration - update needed to cope with new assay definitions

  blockerbugdocumentation
  ISA-tools/isa-api#517 · Filter by author proccaserra opened on Jan 8, 2024
  

• copy function invoked by json2isatab converter has side effects

  documentationenhancement
  ISA-tools/isa-api#516 · Filter by author proccaserra opened on Dec 18, 2023
  

• ISATAB serialization: effect of presence/absence to "Term Source REF" "Term Accession" on parsing

  documentation
  ISA-tools/isa-api#515 · Filter by author proccaserra opened on Dec 18, 2023
  

• Labeled Extract silently dropped from ISA JSON serialization if Label not declared

  bug
  ISA-tools/isa-api#513 · Filter by author proccaserra opened on Nov 10, 2023
  

• create a helper function to compute checksums for all 'Data File' objects

  ISA-tools/isa-api#512 · Filter by author proccaserra opened on Nov 2, 2023

• Multiple Data Files of The Same Type Will Only Have 1 Name in Assay Conversion

  ISA-tools/isa-api#509 · Filter by author ptth222 opened on Nov 1, 2023
  2

• allow more than one identifier for ISA.Study

  ISA-tools/isa-api#508 · Filter by author proccaserra opened on Oct 31, 2023

• Different Protocol Names In Study Sequence Cause An Error

  ISA-tools/isa-api#501 · Filter by author ptth222 opened on Aug 28, 2023