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Embedding fixes - #154

Merged

haeussma merged 9 commits into

mainfrom

embedding_fixes

Sep 3, 2025

Merged

Embedding fixes#154
haeussma merged 9 commits into
mainfrom
embedding_fixes

Commits on Jun 30, 2025
- added normalization
  NiklasAbraham
  committed
  fe2633d
- fixed custom relationships in CARD Ontology
  NiklasAbraham
  committed
  3960148
Commits on Jul 1, 2025
- fixed elementID()
  NiklasAbraham
  committed
  4d0dcbc
Commits on Jul 5, 2025
- fixed realtionship bugs in mutataion
  NiklasAbraham
  committed
  b26bf88
- Update src/pyeed/embeddings/models/prott5.py
  
  NiklasAbraham
  and
  Copilot
  authored
  acbae54
- Update src/pyeed/analysis/sequence_alignment.py
  
  NiklasAbraham
  and
  Copilot
  authored
  7cf4f7a
Commits on Jul 7, 2025
- ruff and mypy fixes
  NiklasAbraham
  committed
  707c6b2
Commits on Aug 14, 2025
- update of fixes
  NiklasAbraham
  committed
  65eebcd
Commits on Sep 2, 2025
- shcem afiles
  NiklasAbraham
  committed
  2ae999b