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@d3b-center

D3b

Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia

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  1. bixtools bixtools Public

    🐳 Dockerfiles for bioinformatics tools

    Dockerfile 18 4

Repositories

Showing 10 of 158 repositories
  • flying_nimbus Public
    d3b-center/flying_nimbus's past year of commit activity
    Go 2 MIT 0 6 1 Updated Oct 23, 2026
  • bixu-airflow-deps Public
    d3b-center/bixu-airflow-deps's past year of commit activity
    0 0 0 0 Updated Oct 22, 2026
  • fw-move-session-to-proj Public

    Flywheel gear to move session to a destination project

    d3b-center/fw-move-session-to-proj's past year of commit activity
    Python 0 0 0 0 Updated Oct 17, 2026
  • plgg-atlas-phenotyping Public

    Atlas-based MRI spatial phenotyping of pediatric low-grade glioma: registration to a pediatric template, quality control, atlas-derived features, and probability maps.

    d3b-center/plgg-atlas-phenotyping's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 8, 2026
  • D3b-Pathogenicity-Assessment Public

    In collaboration with the Diskin lab, this repo houses a workflow designed to take in KF annotated vcf files, and further annotate for pathogenicity prediction

    d3b-center/D3b-Pathogenicity-Assessment's past year of commit activity
    Common Workflow Language 1 Apache-2.0 2 1 0 Updated Sep 17, 2026
  • dewrangle-id-minting-process Public
    d3b-center/dewrangle-id-minting-process's past year of commit activity
    Python 0 0 0 0 Updated Sep 15, 2026
  • D3b-RADIANT-Annotation Public

    VCF annotation workflow for the RADIANT program

    d3b-center/D3b-RADIANT-Annotation's past year of commit activity
    Nextflow 0 Apache-2.0 1 0 0 Updated Sep 10, 2026
  • d3b-target-redcap Public

    This is a custom Meltano target for loading data to REDCap

    d3b-center/d3b-target-redcap's past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 10, 2026
  • bixtools Public

    🐳 Dockerfiles for bioinformatics tools

    d3b-center/bixtools's past year of commit activity
    Dockerfile 18 4 0 2 Updated Aug 24, 2026
  • peds-brain-auto-seg-public Public

    D3b PedsBrainAutoSeg tool (public realease)

    d3b-center/peds-brain-auto-seg-public's past year of commit activity
    Python 7 1 0 0 Updated Aug 18, 2026
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