Seung Lab

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1. connected-components-3d connected-components-3d Public

   Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

   C++ 464 50

2. euclidean-distance-transform-3d euclidean-distance-transform-3d Public

   Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

   C++ 269 42

3. kimimaro kimimaro Public

   Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

   C++ 217 29

4. cloud-volume cloud-volume Public

   Read and write Neuroglancer datasets programmatically.

   Python 175 54

5. DracoPy DracoPy Public

   Python wrapper for Google's Draco mesh compression library.

   Python 120 32

6. znn-release znn-release Public archive

   Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

   C++ 95 32